Duaer

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Search pathways in Duaer

In Duaer, search Reactome pathways with Duaer Data. One successful search uses 1 credit. Use pathwayId with proteins.pathway. This page includes the full English call skill.

What you get

Pathways in the Duaer data market searches Reactome. One successful search uses 1 credit.

Add the node from the Duaer Data category (Pathways), or copy the skill on the data market. Use pathwayId with Proteins Pathway.

Search on the canvas

  1. Open the node creator, select Duaer Data, then Pathways.
  2. Words alone is enough (a new node starts with insulin). Pathway ID and Name are optional. Word searches default to Homo sapiens.
  3. Limit defaults to 10, max 20. Select Execute step.

A successful search uses 1 credit. Use pathwayId as pathway when searching proteins. Production deliverables land in the data pool.

Call the API

  • GET https://api.duaer.com/v1/data/pathways?...
  • Authorization: Bearer <Duaer key>
  • Fields combine; at least one search field is required.

For keys, refer to Authentication for the Duaer public API. Below is the same English call skill as Copy skill.

Call skill

Same text as Copy skill on the Duaer data market. Keep it English.

---
name: duaer-pathways
description: >-
  Search Reactome pathways through Duaer. Use the pathwayId with proteins.pathway.
  One successful search uses 1 Duaer credit.
---

# Duaer pathways

Search Reactome pathways through Duaer with a Duaer key.

## Call

`GET https://api.duaer.com/v1/data/pathways?q=insulin&limit=10`

Header: `Authorization: Bearer <Duaer key>`

Use an account key or a model API key.

At least one search field is required. Fields combine.
Search with `q` first; use `id` only when you already have it from a result.
Word searches default to Homo sapiens pathways.

- `q` — words in the pathway name or summary.
- `id` — optional. Reactome pathway id from a result (`pathwayId`), such as `R-HSA-264876`.
- `name` — optional. Pathway name.
- `limit` — optional. From 1 to 20. Default 10.

## Result

Each item has `source`, `title`, `url`, `summary`, `pathwayId`, `dbId`, `stIdVersion`, `species`, `browserUrl`, `diagramUrl`, `figureUrl`, `hasDiagram`, `hasEHLD`, `isDisease`, `doi`, `releaseDate`, `lastUpdatedDate`, `compartments`, `compartmentAccessions`, `goId`, `goName`, and `schemaClass`.
Use `pathwayId` as `pathway` when searching proteins. Reuse `pathwayId` in `id` for an exact lookup.
Open `browserUrl` for the interactive Reactome diagram, or `diagramUrl` for a PNG export. Exact id lookup fills more fields (doi, GO, figure, dates) than a words search.

## Credits

One successful search uses 1 credit.
An empty search, a failed search, a compound that matches nothing, or no remaining credits uses 0.
No remaining credits returns 402 and does not search.
A missing key returns 401.

Questions

Where do I use a pathway from Duaer?

Put the item pathwayId into the Proteins Pathway field in Duaer.

Where is the pathway diagram in Duaer?

Open browserUrl for the interactive Reactome diagram, or diagramUrl for a PNG.

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