Duaer

Get started

Search PRIDE in Duaer

In Duaer, search PRIDE proteomics projects with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

What you get

PRIDE in the Duaer data market returns proteomics project accessions, organisms, keywords, and DOI. One successful search uses 1 credit.

Add the node from the Duaer Data category (PRIDE), or copy the skill on the data market. Related: GEO.

Search on the canvas

  1. Open the node creator, select Duaer Data, then PRIDE.
  2. Enter Words (a new node starts with insulin), or a PRIDE id such as PXD000001.
  3. Limit defaults to 10, max 20. Select Execute step.

A successful search uses 1 credit. Production deliverables land in the data pool.

Call the API

  • GET https://api.duaer.com/v1/data/pride?...
  • Authorization: Bearer <Duaer key>
  • words or id is required.

For keys, refer to Authentication for the Duaer public API. Below is the same English call skill as Copy skill.

Call skill

Same text as Copy skill on the Duaer data market. Keep it English.

---
name: duaer-pride
description: >-
  Search proteomics projects in PRIDE through Duaer.
  One successful search uses 1 Duaer credit.
---

# Duaer PRIDE

Search proteomics projects in PRIDE through Duaer with a Duaer key.

## Call

`GET https://api.duaer.com/v1/data/pride?words=insulin&limit=10`

Header: `Authorization: Bearer <Duaer key>`

Use an account key or a model API key.

Provide `words` or `id`.

- `words` — project words, such as insulin.
- `id` — optional. PRIDE accession such as PXD000001.
- `limit` — optional. From 1 to 20. Default 10.

## Result

Each item has `source`, `title`, `url`, `summary`, `prideId`, `description`, `organisms`, `keywords`, `doi`, `publicationDate`, and `instruments`.
Related geo: https://skills.duaer.com/geo.md.
Related proteins: https://skills.duaer.com/proteins.md.

## Credits

One successful search uses 1 credit.
An empty search, a failed search, a compound that matches nothing, or no remaining credits uses 0.
No remaining credits returns 402 and does not search.
A missing key returns 401.

Questions

How do Duaer PRIDE, GEO, and Proteins differ?

GEO emphasizes expression array/sequencing datasets. Proteins uses UniProt entries. PRIDE is a mass-spectrometry proteomics project archive.

In this section

Get started

Search GEO in Duaer

In Duaer, search NCBI GEO series and datasets with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

Get started

Search proteins in Duaer

In Duaer, search genes and proteins with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

Get started

Search expression in Duaer

In Duaer, search GTEx median tissue expression with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

Get started

Use the Duaer data market

In Duaer, the data market lists data you can fetch, what you get, and the price. The sidebar item sits directly under Data pool. Opening the catalog does not run a search.