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Search orthologs in Duaer

In Duaer, search cross-species orthologs with Duaer Data (MyGene HomoloGene). One successful search uses 1 credit. This page includes the full English call skill.

What you get

Orthologs in the Duaer data market lists cross-species genes in a HomoloGene group. One successful search uses 1 credit.

Add the node from the Duaer Data category (Orthologs), or copy the skill on the data market. Related: Genes and Organisms.

Search on the canvas

  1. Open the node creator, select Duaer Data, then Orthologs.
  2. Gene is required (a new node starts with INS). Species defaults to 9606; Ortholog species is optional (for example 10090 to keep mouse only).
  3. Limit defaults to 10, max 20. Select Execute step.

A successful search uses 1 credit. Production deliverables land in the data pool.

Call the API

  • GET https://api.duaer.com/v1/data/orthologs?...
  • Authorization: Bearer <Duaer key>
  • gene is required.

For keys, refer to Authentication for the Duaer public API. Below is the same English call skill as Copy skill.

Call skill

Same text as Copy skill on the Duaer data market. Keep it English.

---
name: duaer-orthologs
description: >-
  Search cross-species orthologs through Duaer (MyGene HomoloGene).
  One successful search uses 1 Duaer credit.
---

# Duaer orthologs

Search cross-species orthologs through Duaer with a Duaer key.

## Call

`GET https://api.duaer.com/v1/data/orthologs?gene=INS&species=9606&limit=10`

Header: `Authorization: Bearer <Duaer key>`

Use an account key or a model API key.

`gene` is required.

- `gene` — gene symbol or NCBI Gene id. Look up symbols with https://skills.duaer.com/genes.md.
- `species` — optional. NCBI taxonomy id for the query gene. Default `9606` (human). Look up ids with https://skills.duaer.com/organisms.md.
- `orthologSpecies` — optional. Keep only orthologs for this taxonomy id (for example `10090` for mouse).
- `limit` — optional. From 1 to 20. Default 10.

## Result

Each item has `source`, `title`, `url`, `summary`, `gene`, `geneId`, `name`, `taxId`, `organism`, `ensemblId`, `homologeneId`, `queryGene`, and `queryTaxId`.
Reuse `gene` when searching proteins, genes, expression, or targets.

## Credits

One successful search uses 1 credit.
An empty search, a failed search, a compound that matches nothing, or no remaining credits uses 0.
No remaining credits returns 402 and does not search.
A missing key returns 401.

Questions

What does Ortholog species do in Duaer?

It keeps only members for that taxonomy id; leave it empty to return every species in the HomoloGene group.

In this section

Get started

Search genes in Duaer

In Duaer, search genes with Duaer Data. One successful search uses 1 credit. Use the symbol with proteins.gene. This page includes the full English call skill.

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Search organisms in Duaer

In Duaer, search UniProt taxonomy with Duaer Data. One successful search uses 1 credit. Use the scientific name with proteins/structures organism, and taxonId with taxonomyId. This page includes the full English call skill.

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Search proteins in Duaer

In Duaer, search genes and proteins with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

Get started

Search targets in Duaer

In Duaer, search Open Targets gene–disease associations with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

Get started

Use the Duaer data market

In Duaer, the data market lists data you can fetch, what you get, and the price. The sidebar item sits directly under Data pool. Opening the catalog does not run a search.