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Look up AlphaFold structures in Duaer

In Duaer, look up AlphaFold predicted structures by gene or UniProt accession with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

What you get

AlphaFold in the Duaer data market returns predicted structures (pLDDT, PDB/CIF urls). One successful search uses 1 credit.

Add the node from the Duaer Data category (AlphaFold), or copy the skill on the data market. Related: Structures for experimental PDB entries.

Search on the canvas

  1. Open the node creator, select Duaer Data, then AlphaFold.
  2. Enter Gene (a new node starts with INS) or Accession (such as P01308; accession wins when both are set).
  3. Organism is optional when resolving Gene (default Homo sapiens). Limit defaults to 10, max 20. Select Execute step.

A successful search uses 1 credit. Production deliverables land in the data pool.

Call the API

  • GET https://api.duaer.com/v1/data/alphafold?...
  • Authorization: Bearer <Duaer key>
  • gene or accession is required.

For keys, refer to Authentication for the Duaer public API. Below is the same English call skill as Copy skill.

Call skill

Same text as Copy skill on the Duaer data market. Keep it English.

---
name: duaer-alphafold
description: >-
  Look up AlphaFold predicted structures through Duaer by gene or UniProt accession.
  One successful search uses 1 Duaer credit.
---

# Duaer AlphaFold

Look up AlphaFold predicted structures through Duaer with a Duaer key.

## Call

`GET https://api.duaer.com/v1/data/alphafold?gene=INS&organism=Homo%20sapiens&limit=10`

Header: `Authorization: Bearer <Duaer key>`

Use an account key or a model API key.

Provide `gene` or `accession` (or both; accession wins).

- `gene` — gene symbol resolved via UniProt (default organism Homo sapiens).
- `accession` — optional. UniProt accession (`P01308`). Overrides gene when set.
- `organism` — optional. Used when resolving gene (default `Homo sapiens`).
- `limit` — optional. From 1 to 20. Default 10.

## Result

Each item has `source`, `title`, `url`, `summary`, `accession`, `gene`, `uniprotId`, `description`, `organism`, `modelEntityId`, `modelVersion`, `globalPlddt`, `pdbUrl`, and `cifUrl`.
Related experimental structures: https://skills.duaer.com/structures.md.
Related proteins: https://skills.duaer.com/proteins.md.

## Credits

One successful search uses 1 credit.
An empty search, a failed search, a compound that matches nothing, or no remaining credits uses 0.
No remaining credits returns 402 and does not search.
A missing key returns 401.

Questions

Gene or Accession for Duaer AlphaFold?

Use Accession when you have a UniProt id. Otherwise use Gene; Duaer resolves it through UniProt before calling AlphaFold.

In this section

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Search protein structures in Duaer

In Duaer, search protein structures with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

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Search proteins in Duaer

In Duaer, search genes and proteins with Duaer Data. One successful search uses 1 credit. This page includes the full English call skill.

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Search genes in Duaer

In Duaer, search genes with Duaer Data. One successful search uses 1 credit. Use the symbol with proteins.gene. This page includes the full English call skill.

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Use the Duaer data market

In Duaer, the data market lists data you can fetch, what you get, and the price. The sidebar item sits directly under Data pool. Opening the catalog does not run a search.